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@jbrowse/plugin-sequence

JBrowse 2 sequence adapters, tracks, etc.

23
Versions
Apache-2.0
License
No
Install Scripts
Verified
Provenance

Supply chain provenance

Status for the latest visible version.

SLSA provenance attestation npm registry signatures No source commit

Maintainers

garrettjstevensrbuelscmdcolin

Keywords

jbrowsejbrowse2

Accepted risks

Findings the reviewer chose to accept rather than block on.

SourceRuleReasonAccepted byWhen
maintainer-change maintainer-removed AI (maintainer-change): Maintainer list cleanup consistent with org-level CI publishing transition; no malicious indicators. ai
provenance publisher-changed AI (provenance): Transition to GitHub Actions CI publishing with SLSA attestation; legitimate pipeline change for GMOD/jbrowse-components. ai
provenance missing-githead AI (provenance): Long-established package with trusted publisher; missing gitHead is a minor CI environment change, not a supply-chain indicator. ai
publish-pattern new-deps-added AI (publish-pattern): @jbrowse/mobx-state-tree is a first-party JBrowse org package replacing mobx-state-tree; not a suspicious dependency. ai
phantom-deps phantom-dep:@jbrowse/plugin-wiggle AI (phantom-deps): Same-org sibling dep declared in package.json; phantom-dep heuristic false positive for this package. ai
dependencies unvetted-dep:@jbrowse/plugin-linear-genome-view AI (dependencies): Internal sibling dep from the same JBrowse monorepo; stable false positive for this package. ai
dependencies unvetted-dep:@jbrowse/core AI (dependencies): Internal sibling dep from the same JBrowse monorepo; stable false positive for this package. ai
provenance no-provenance AI (provenance): JBrowse monorepo packages consistently lack provenance; stable false positive for this publisher. ai

Versions (showing 23 of 23)

Version Deps Published
4.3.0 10 / 0
4.2.1 10 / 0
4.2.0 10 / 0
4.1.15 10 / 0
4.1.14 10 / 0
4.1.13 10 / 0
4.1.12 10 / 0
4.1.11 10 / 0
4.1.10 10 / 0
4.1.9 10 / 0
4.1.8 10 / 0
4.1.7 10 / 0
4.1.6 10 / 0
4.1.5 10 / 0
4.1.4 10 / 0
4.1.3 10 / 0
4.1.1 10 / 0
4.0.4 10 / 0
4.0.3 10 / 0
4.0.2 10 / 0
4.0.1 10 / 0
4.0.0 10 / 0
3.7.0 11 / 0

v4.3.0

3 findings
HIGH Missing gitHead — previous versions had it provenance

This version has no gitHead field linking it to a source commit, but previous versions did. This suggests the publish environment changed. Published by: GitHub Actions.

HIGH Publisher changed: cmdcolin → GitHub Actions (on 2026-05-21) provenance

This version was published by a different npm account than previous versions on 2026-05-21. This could indicate a legitimate maintainer transition or an account compromise.

INFO Has SLSA provenance attestation provenance

Published via CI/CD with Sigstore attestation (predicate: https://slsa.dev/provenance/v1). This is the strongest supply chain integrity signal.

v4.2.1

3 findings
HIGH Missing gitHead — previous versions had it provenance

This version has no gitHead field linking it to a source commit, but previous versions did. This suggests the publish environment changed. Published by: GitHub Actions.

HIGH Publisher changed: cmdcolin → GitHub Actions (on 2026-04-27) provenance

This version was published by a different npm account than previous versions on 2026-04-27. This could indicate a legitimate maintainer transition or an account compromise.

INFO Has SLSA provenance attestation provenance

Published via CI/CD with Sigstore attestation (predicate: https://slsa.dev/provenance/v1). This is the strongest supply chain integrity signal.

v4.2.0

3 findings
HIGH Missing gitHead — previous versions had it provenance

This version has no gitHead field linking it to a source commit, but previous versions did. This suggests the publish environment changed. Published by: GitHub Actions.

HIGH Publisher changed: cmdcolin → GitHub Actions (on 2026-04-16) provenance

This version was published by a different npm account than previous versions on 2026-04-16. This could indicate a legitimate maintainer transition or an account compromise.

INFO Has SLSA provenance attestation provenance

Published via CI/CD with Sigstore attestation (predicate: https://slsa.dev/provenance/v1). This is the strongest supply chain integrity signal.

v4.1.15

1 finding
LOW No provenance attestation provenance

Package was published without Sigstore provenance. Only ~12% of npm packages have provenance, so this is common but not ideal.

v4.1.14

2 findings
HIGH Missing gitHead — previous versions had it provenance

This version has no gitHead field linking it to a source commit, but previous versions did. This suggests the publish environment changed. Published by: cmdcolin.

INFO No provenance attestation provenance

[Accepted risk] Package was published without Sigstore provenance. Consider requesting the maintainer enable provenance via CI/CD.

v4.1.13

2 findings
HIGH Missing gitHead — previous versions had it provenance

This version has no gitHead field linking it to a source commit, but previous versions did. This suggests the publish environment changed. Published by: cmdcolin.

INFO No provenance attestation provenance

[Accepted risk] Package was published without Sigstore provenance. Consider requesting the maintainer enable provenance via CI/CD.

v4.1.12

2 findings
HIGH Missing gitHead — previous versions had it provenance

This version has no gitHead field linking it to a source commit, but previous versions did. This suggests the publish environment changed. Published by: cmdcolin.

INFO No provenance attestation provenance

[Accepted risk] Package was published without Sigstore provenance. Consider requesting the maintainer enable provenance via CI/CD.

v4.1.11

2 findings
HIGH Missing gitHead — previous versions had it provenance

This version has no gitHead field linking it to a source commit, but previous versions did. This suggests the publish environment changed. Published by: cmdcolin.

INFO No provenance attestation provenance

[Accepted risk] Package was published without Sigstore provenance. Consider requesting the maintainer enable provenance via CI/CD.

v4.1.10

2 findings
HIGH Missing gitHead — previous versions had it provenance

This version has no gitHead field linking it to a source commit, but previous versions did. This suggests the publish environment changed. Published by: cmdcolin.

INFO No provenance attestation provenance

[Accepted risk] Package was published without Sigstore provenance. Consider requesting the maintainer enable provenance via CI/CD.

v4.1.9

2 findings
HIGH Missing gitHead — previous versions had it provenance

This version has no gitHead field linking it to a source commit, but previous versions did. This suggests the publish environment changed. Published by: cmdcolin.

INFO No provenance attestation provenance

[Accepted risk] Package was published without Sigstore provenance. Consider requesting the maintainer enable provenance via CI/CD.

v4.1.8

2 findings
HIGH Missing gitHead — previous versions had it provenance

This version has no gitHead field linking it to a source commit, but previous versions did. This suggests the publish environment changed. Published by: cmdcolin.

INFO No provenance attestation provenance

[Accepted risk] Package was published without Sigstore provenance. Consider requesting the maintainer enable provenance via CI/CD.

v4.1.7

2 findings
HIGH Missing gitHead — previous versions had it provenance

This version has no gitHead field linking it to a source commit, but previous versions did. This suggests the publish environment changed. Published by: cmdcolin.

INFO No provenance attestation provenance

[Accepted risk] Package was published without Sigstore provenance. Consider requesting the maintainer enable provenance via CI/CD.

v4.1.6

1 finding
LOW No provenance attestation provenance

Package was published without Sigstore provenance. Only ~12% of npm packages have provenance, so this is common but not ideal.

v4.1.5

2 findings
HIGH Missing gitHead — previous versions had it provenance

This version has no gitHead field linking it to a source commit, but previous versions did. This suggests the publish environment changed. Published by: cmdcolin.

INFO No provenance attestation provenance

[Accepted risk] Package was published without Sigstore provenance. Consider requesting the maintainer enable provenance via CI/CD.

v4.1.4

2 findings
HIGH Missing gitHead — previous versions had it provenance

This version has no gitHead field linking it to a source commit, but previous versions did. This suggests the publish environment changed. Published by: cmdcolin.

INFO No provenance attestation provenance

[Accepted risk] Package was published without Sigstore provenance. Consider requesting the maintainer enable provenance via CI/CD.

v4.1.3

2 findings
HIGH Missing gitHead — previous versions had it provenance

This version has no gitHead field linking it to a source commit, but previous versions did. This suggests the publish environment changed. Published by: cmdcolin.

INFO No provenance attestation provenance

[Accepted risk] Package was published without Sigstore provenance. Consider requesting the maintainer enable provenance via CI/CD.

v4.1.1

2 findings
HIGH Missing gitHead — previous versions had it provenance

This version has no gitHead field linking it to a source commit, but previous versions did. This suggests the publish environment changed. Published by: cmdcolin.

INFO No provenance attestation provenance

[Accepted risk] Package was published without Sigstore provenance. Consider requesting the maintainer enable provenance via CI/CD.

v4.0.4

2 findings
HIGH Missing gitHead — previous versions had it provenance

This version has no gitHead field linking it to a source commit, but previous versions did. This suggests the publish environment changed. Published by: cmdcolin.

INFO No provenance attestation provenance

[Accepted risk] Package was published without Sigstore provenance. Consider requesting the maintainer enable provenance via CI/CD.

v4.0.3

2 findings
HIGH Missing gitHead — previous versions had it provenance

This version has no gitHead field linking it to a source commit, but previous versions did. This suggests the publish environment changed. Published by: cmdcolin.

INFO No provenance attestation provenance

[Accepted risk] Package was published without Sigstore provenance. Consider requesting the maintainer enable provenance via CI/CD.

v4.0.2

2 findings
HIGH Missing gitHead — previous versions had it provenance

This version has no gitHead field linking it to a source commit, but previous versions did. This suggests the publish environment changed. Published by: cmdcolin.

INFO No provenance attestation provenance

[Accepted risk] Package was published without Sigstore provenance. Consider requesting the maintainer enable provenance via CI/CD.

v4.0.1

2 findings
HIGH Missing gitHead — previous versions had it provenance

This version has no gitHead field linking it to a source commit, but previous versions did. This suggests the publish environment changed. Published by: cmdcolin.

INFO No provenance attestation provenance

[Accepted risk] Package was published without Sigstore provenance. Consider requesting the maintainer enable provenance via CI/CD.

v4.0.0

2 findings
HIGH Missing gitHead — previous versions had it provenance

This version has no gitHead field linking it to a source commit, but previous versions did. This suggests the publish environment changed. Published by: cmdcolin.

INFO No provenance attestation provenance

[Accepted risk] Package was published without Sigstore provenance. Consider requesting the maintainer enable provenance via CI/CD.

v3.7.0

1 finding
LOW No provenance attestation provenance

Package was published without Sigstore provenance. Only ~12% of npm packages have provenance, so this is common but not ideal.